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en:centro:servizos:hpc [2023/03/03 14:00] – [Status of Jobs in the queuing system] fernando.guillen | en:centro:servizos:hpc [2024/10/08 09:55] (current) – [CONDA] jorge.suarez | ||
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To access the cluster, access must be requested in advance via [[https:// | To access the cluster, access must be requested in advance via [[https:// | ||
- | The access is done through an SSH connection to the login node: | + | The access is done through an SSH connection to the login node (172.16.242.211): |
<code bash> | <code bash> | ||
ssh < | ssh < | ||
Line 160: | Line 160: | ||
<code bash> | <code bash> | ||
# Getting miniconda | # Getting miniconda | ||
- | wget https:// | + | wget https:// |
# Install | # Install | ||
- | sh Miniconda3-py39_4.11.0-Linux-x86_64.sh | + | bash Miniconda3-latest-Linux-x86_64.sh |
+ | # Initialize for bash shell | ||
+ | ~/ | ||
</ | </ | ||
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==== Sending a job to the queue system ==== | ==== Sending a job to the queue system ==== | ||
== Requesting resources == | == Requesting resources == | ||
- | By default, if you submit a job without specifying anything, the system submits it to the default (regular) QOS and assigns it a node, a CPU and all available memory. The time limit for job execution is that of the queue (4 days and 4 hours). | + | By default, if you submit a job without specifying anything, the system submits it to the default (regular) QOS and assigns it a node, a CPU and 4 GB. The time limit for job execution is that of the queue (4 days and 4 hours). |
This is very inefficient, | This is very inefficient, | ||
- %%Node number (-N or --nodes), tasks (-n or --ntasks) and/or CPUs per task (-c or --cpus-per-task).%% | - %%Node number (-N or --nodes), tasks (-n or --ntasks) and/or CPUs per task (-c or --cpus-per-task).%% | ||
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# Get interactive access to a node (Press Ctrl+D to exit): | # Get interactive access to a node (Press Ctrl+D to exit): | ||
hpc-login2 ~]$ salloc -N1 | hpc-login2 ~]$ salloc -N1 | ||
+ | # Get interactive EXCLUSIVE access to a node | ||
+ | hpc-login2 ~]$ salloc -N1 --exclusive | ||
</ | </ | ||
3. SRUN \\ | 3. SRUN \\ |